BEIR — unified schema
Collection
The BEIR retrieval datasets, normalised to one strict schema with full provenance. • 15 items • Updated
Datasets:
Tasks:
Text Retrieval
Modalities:
Text
Formats:
parquet
Sub-tasks:
document-retrieval
Languages:
English
Size:
100K - 1M
License:
id stringlengths 8 8 | title stringlengths 0 1.19k | text stringlengths 0 122k |
|---|---|---|
0002xs6a | The Father-Daughter Dinner Dance: A Waltz With Ethics and COVID-19 Commentary on "The Father-Daughter Dinner Dance: A Waltz With Ethics and COVID-19" | |
000ahtxm | Epidemiological and clinical characteristics of 136 cases of COVID-19 in main district of Chongqing | BACKGROUND: We did a comprehensive exploration of the epidemiological and clinical characteristics of 136 patients with confirmed COVID-19 in main district of Chongqing which was adjacent to the west of Hubei province. METHODS: This study was conducted on 136 patients with COVID-19 in main district of Chongqing from Ja... |
000ajevz | Late‐onset Pneumocystis jirovecii pneumonia post–fludarabine, cyclophosphamide and rituximab: implications for prophylaxis | OBJECTIVE: Fludarabine, cyclophosphamide and rituximab (FCR) therapy for lymphoid malignancies has historically been associated with a low reported incidence of Pneumocystis jirovecii pneumonia (PJP). However, prophylaxis was routinely used in early studies, and molecular diagnostic tools were not employed. The objecti... |
000bb2uc | COVID-19 and diabetes mellitus: implications for prognosis and clinical management | INTRODUCTION: COVID-19 is a novel coronavirus that emerged from Wuhan, China in December 2019, and within 3 months became a global pandemic. AREAS COVERED: PubMed search of published data on COVID-19, respiratory infections, and diabetes mellitus (DM). DM associates with impairments of both cellular and humoral immunit... |
000gk4or | Editorial - Sofosbuvir/Velpatasvir as a combination with strong potential activity against SARS-CoV2 (COVID-19) infection: how to use direct-acting antivirals as broad-spectrum antiviral agents | |
000q5l5n | Seroprevalence of Rodent Pathogens in Wild Rats from the Island of St. Kitts, West Indies | SIMPLE SUMMARY: The role of rodents in the transmission of many diseases is widely known. Wild rats abundant in urban environments may transmit diseases to humans and other animals, including laboratory rodents used for biomedical research in research facilities, possibly compromising research data. In order to gather ... |
000tfenb | Prevalence and genetic diversity analysis of human coronaviruses among cross-border children | BACKGROUND: More than a decade after the outbreak of human coronaviruses (HCoVs) SARS in Guangdong province and Hong Kong SAR of China in 2002, there is still no reoccurrence, but the evolution and recombination of the coronaviruses in this region are still unknown. Therefore, surveillance on the prevalence and the vir... |
0013to28 | Technical considerations for developing enzyme immunohistochemical staining procedures on formalin-fixed paraffin-embedded tissues for diagnostic pathology. | |
001jvz8y | Corrigendum to "Factors Associated With Intubation and Prolonged Intubation in Hospitalized Patients With COVID-19" | |
001skdgj | PERSISTENT CORONAVIRUS INFECTION OF PROGENITOR OLIGODENDROCYTES | |
001u8ecb | On the diverse and opposing effects of nutrition on pathogen virulence | Climate change and anthropogenic activity are currently driving large changes in nutritional availability across ecosystems, with consequences for infectious disease. An increase in host nutrition could lead to more resources for hosts to expend on the immune system or for pathogens to exploit. In this paper, we report... |
001wbz6e | Pharmaceutical biotechnology | |
0021yo3o | Procalcitonin in children with suspected novel influenza A (H1N1) infection | |
002czx8v | Psychometric properties of measures of substance use: a systematic review and meta-analysis of reliability, validity and diagnostic test accuracy. | BACKGROUND Synthesis of psychometric properties of substance use measures to identify patterns of use and substance use disorders remains limited. To address this gap, we sought to systematically evaluate the psychometric properties of measures to detect substance use and misuse. METHODS We conducted a systematic revie... |
002hv1oz | Assessment of celecoxib poly(lactic-co-glycolic) acid nanoformulation on drug pharmacodynamics and pharmacokinetics in rats. | OBJECTIVE Celecoxib (CEL) is a nonsteroidal anti-inflammatory drug (NSAID) showing selective cycloxygenase-2 inhibition. While effective as a pain reducer, CEL exerts some negative influence on renal and gastrointestinal parameters. This study examined CEL pharmacodynamics and pharmacokinetics following drug reformulat... |
003qgdxv | Laparoscopic ventral hernia repair: defining the learning curve. | Between 2004 and June 2011, 181 patients underwent laparoscopic ventral hernia repair. Three main surgeons, all experienced in laparoscopic procedures, performed all the cases. After analyzing the operative time (OT) for 3 main surgeons, within the first 20 cases the overall performance plateaued. Data from 60 patients... |
003r4sjl | SAT Solving with Fragmented Hamiltonian Path Constraints for Wire Arc Additive Manufacturing | In Wire Arc Additive Manufactoring (WAAM), an object is welded from scratch. Finding feasible welding paths that make use of the potential of the technology is a computationally complex problem as it requires planning paths in 3D. All parts of the object to be manufactured have to be visited in few welding paths. The s... |
004a6lit | Natural Products from Sponges | The sponge is one of the oldest multicellular invertebrates in the world. Marine sponges represent one of the extant metazoans of 700–800 million years. They are classified in four major classes: Calcarea, Demospongiae, Hexactinellida, and Homoscleromorpha. Among them, three genera, namely, Haliclona, Petrosia, and Dis... |
004f8w68 | Pulse oximeter plethysmograph variation and its relationship to the arterial waveform in mechanically ventilated children. | The variations induced by mechanical ventilation in the arterial pulse pressure and pulse oximeter plethysmograph waveforms have been shown to correlate closely and be effective in adults as markers of volume responsiveness. The aims of our study were to investigate: (1) the feasibility of recording plethysmograph indi... |
004jbsgy | Does this recent randomised controlled trial of intermittent pneumatic compression devices really indicate that they are ineffective in critical care patients? | |
0053p2ji | A laparoscopic approach for removal of ovarian remnant tissue in 32 dogs. | BACKGROUND Surgical treatment of ovarian remnant syndrome (ORS) in dogs usually necessitates large celiotomies and considerable manipulation of organs because of the relatively deep position of ovarian remnant tissue, large patient size, and often encountered adhesions. In women, laparoscopic treatment of ORS is succes... |
005b28b9 | Population-based analysis of 4113 patients with acute cholecystitis: defining the optimal time-point for laparoscopic cholecystectomy. | OBJECTIVE To compare clinical outcomes after laparoscopic cholecystectomy (LC) for acute cholecystitis performed at various time-points after hospital admission. BACKGROUND Symptomatic gallstones represent an important public health problem with LC the treatment of choice. LC is increasingly offered for acute cholecyst... |
005b2j4b | Monophyletic Relationship between Severe Acute Respiratory Syndrome Coronavirus and Group 2 Coronaviruses | Although primary genomic analysis has revealed that severe acute respiratory syndrome coronavirus (SARS CoV) is a new type of coronavirus, the different protein trees published in previous reports have provided no conclusive evidence indicating the phylogenetic position of SARS CoV. To clarify the phylogenetic relation... |
0065qkn2 | Atmospheric Plasma Supported by TiO(2) Catalyst for Decolourisation of Reactive Orange 16 Dye in Water | PURPOSE: Every advanced oxidation process (AOP) has its limitations in water purification. Novel designs with simultaneous application of different AOPs can offer better solutions for cleaner water. METHODS: We have comparatively studied two advanced oxidation processes (AOPs) on decolourisation of Reactive Orange 16 (... |
006ctwqu | Why lockdown of the elderly is not ageist and why levelling down equality is wrong | In order to prevent the rapid spread of COVID-19, governments have placed significant restrictions on liberty, including preventing all non-essential travel. These restrictions were justified on the basis the health system may be overwhelmed by COVID-19 cases and in order to prevent deaths. Governments are now consider... |
006k39tj | FACTORS INFLUENCING MENTAL HEALTH DURING COVID-19 OUTBREAK: AN EXPLORATORY SURVEY AMONG INDIAN POPULATION | Purpose: Research on the impact of social distancing on mental health during epidemics is limited, especially in India. The purpose of this study is to scale the association between anxiety and socio-demographic factors during Covid19 lockdown among the general Indian population. Design/methodology/approach: A descript... |
0071zp5v | SARS transmission on an aircraft | |
007jyb9j | The use of Google Trends for acral symptoms during COVID-19 outbreak in France | |
007ks0wi | DNACPR notices: campaigner for patients' right to be consulted says government has misunderstood her demands. | |
007qk8nv | A Novel Set of Moment Invariants for Pattern Recognition Applications Based on Jacobi Polynomials | A novel set of moment invariants for pattern recognition applications, which are based on Jacobi polynomials, are presented. These moment invariants are constructed for digital images by means of a combination with geometric moments, and are invariant in the face of affine geometric transformations such as rotation, tr... |
008gkf40 | Management of Heart Failure Patients with COVID-19. A Joint Position Paper of the Chinese Heart Failure Association & National Heart Failure Committee and the Heart Failure Association of the European Society of Cardiology. | The Coronavirus Disease 2019 (COVID-19) pandemic of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection is causing considerable morbidity and mortality worldwide. Multiple reports have suggested that patients with heart failure (HF) are at a higher risk of severe disease and mortality with COVID-19. ... |
008uxxzr | Guidance for the management of adult patients with coronavirus disease 2019 | In December 2019, a novel coronavirus was identified in Wuhan City, Hubei Province, China and later the disease was named coronavirus disease 2019 (COVID-19). On March 11, 2020, the World Health Organization (WHO) officially announced that COVID-19 had reached global pandemic status. This article summarized the underst... |
009jy6hs | Caring for the Vaccine Hesitant Family: Evidence-Based Alternatives to Dismissal | |
009k5htk | SARS-CoV-2 Positivity Rate for Latinos in the Baltimore-Washington, DC Region | |
009sah0e | Oxygen injection site affects FIO2 during noninvasive ventilation. | BACKGROUND Most portable bi-level positive airway pressure devices are not equipped with air-oxygen blenders for precisely regulating oxygen concentrations, and supplemental oxygen must be added to increase the F(IO2). Very few studies have investigated the factors that affect F(IO2), and their conclusions have been in... |
00a19z5i | Testing the modularity of the N-terminal amphipathic helix conserved in picornavirus 2C proteins and hepatitis C NS5A protein | Abstract The N-terminal region of the picornaviral 2C protein is predicted to fold into an amphipathic α-helix that is responsible for the protein's association with membranes in the viral RNA replication complex. We have identified a similar sequence in the N-terminal region of NS5A of hepaciviruses that was recently ... |
00ajdmac | Felidae | |
00ak0ynk | Renal flagellate infections in reptiles: 29 cases. | Renal infection with flagellated protozoa was retrospectively evaluated in 29 reptiles, including 12 turtles, 7 tortoises, and 6 chameleons; overall, 20 species of reptiles were represented. Most cases presented with nonspecific clinical signs or a combination of several concurrent diseases. Nineteen of 29 reptiles had... |
00bnmpna | [Genomic variations in the locus for aminopeptidase N:a putative cellular receptor for SARS-CoV spike glycoprotein]. | Aminopeptidase N has been identified as the cellular receptor for human coronavirus HCoV-229E and was a putative receptor for the spike glycoprotein encoded by the SARS-associated coronavirus (SARS-CoV). We report here identification of 9 single nucleotide polymorphisms (SNPs) in ANPEP, encoding human aminopeptidase N,... |
00bt8sws | Management of ophthalmic perioperative period during 2019 novel coronavirus disease outbreak/ 新型冠状病毒肺炎疫情下眼科患者围手术期管理实践 | Objective: To explore the perioperative management and infection prevention methods for acute eye diseases during the outbreak of 2019 novel coronavirus disease (COVID-19). Methods: Since the COVID-19 was included in the Class B infectious diseases and was managed according to Class A infectious diseases in China, 127 ... |
00bwhaga | The determination of treatment effect of chitosan oligosaccharide in lambs with experimentally cryptosporidiosis | Abstract In this study, it was aimed to investigate the efficacy of chitosan oligosaccharide administrations in different doses of experimental infected lambs with Cryptosporidium parvum. 32 male lambs were used in the study and the lambs were divided into 4 groups with 8 lambs in each group. Groups 1, 2 and 3, twice a... |
00cef9ee | Costal osteochondroma causing pneumothorax in an adolescent: a case report and review of the literature. | Costal osteochondroma is a rare but important condition to recognize because of the possibility of serious consequences if not diagnosed and treated promptly. Patients can present with numerous complications, including hemothorax, pneumothorax, nervous or vascular impingement, and fracture. We report the case of a 17-y... |
00cf294x | Toxin-Based Therapeutic Approaches | Protein toxins confer a defense against predation/grazing or a superior pathogenic competence upon the producing organism. Such toxins have been perfected through evolution in poisonous animals/plants and pathogenic bacteria. Over the past five decades, a lot of effort has been invested in studying their mechanism of a... |
00cl7q1q | Detection and molecular characterization of enteric viruses from poult enteritis syndrome in turkeys | This study was conducted to detect and characterize enteric viruses [rotavirus, turkey astrovirus-2 (TAstV-2), reovirus, and turkey coronavirus] from cases of poult enteritis syndrome (PES) in Minnesota turkeys. Of the intestinal contents collected from 43 PES cases, 25 were positive for rotavirus and 13 for small roun... |
00cqv16h | A Topological Data Analysis Approach on Predicting Phenotypes from Gene Expression Data | The goal of this study was to investigate if gene expression measured from RNA sequencing contains enough signal to separate healthy and afflicted individuals in the context of phenotype prediction. We observed that standard machine learning methods alone performed somewhat poorly on the disease phenotype prediction ta... |
00dindtf | Untapped potential: More US labs could be providing tests for coronavirus | |
00dn2xix | Afstand geboden | Sociaal werk is een cruciaal beroep; het is nodig om de maatschappij te laten draaien, zo bepaalde het kabinet aan het begin van deze viruscrisis. Dat betekent dat we doorwerkten, toen veel andere sectoren stilvielen. Toen de fitness dichtging en de evenementen afgelast werden, stonden sociaal werkers nog in de wijk en... |
00dxpxox | Small-molecule inhibitors as potential therapeutics and as tools to understand the role of phospholipases A2 | Abstract Phospholipase A2 (PLA2) enzymes are involved in various inflammatory pathological conditions including arthritis, cardiovascular and autoimmune diseases. The regulation of their catalytic activity is of high importance and a great effort has been devoted in developing synthetic inhibitors. We summarize the mos... |
00e1vbnd | One-year effectiveness and safety of vedolizumab therapy for inflammatory bowel disease: a prospective multicentre cohort study. | BACKGROUND We recently showed that vedolizumab is effective in patients with Crohn's disease (CD) and ulcerative colitis (UC) with prior anti-TNF failure in a multicentre compassionate early-access programme before marketing authorisation was granted to vedolizumab. AIMS To assess effectiveness and safety of vedolizuma... |
00e86sib | Modified Wake Forest Type Protective Shield for an Asymptomatic, COVID-19 Non-Confirmed Patient for Intubation Undergoing Urgent Surgery. | |
00ecwiic | FOREWORD | |
00fmeepz | Comprehensive overview of COVID-19 based on current evidence | In December 2019, twenty-seven pneumonia patients with unknown causes originated in South China seafood market in Wuhan. The virus infection spread rapidly and swept through China in less than a month. Subsequently, the virus was proven a novel coronavirus and named SARS-CoV-2. The outbreak of novel coronavirus has bee... |
00fxzyhq | American Geriatrics Society (AGS) Policy Brief: COVID‐19 and Assisted Living Facilities | This policy brief sets forth the American Geriatrics Societyʼs (AGSʼs) recommendations to guide federal, state, and local governments when making decisions about care for older adults in assisted living facilities (ALFs) during the coronavirus disease 2019 (COVID‐19) pandemic. It focuses on the need for personal protec... |
00giq6r4 | The association of stroke severity with health-related quality of life in survivors of acute cerebrovascular disease and their informal caregivers during the first year post stroke: a survey study. | PURPOSE To describe the health-related quality of life (HRQoL) of caregivers and survivors of transient ischaemic attack (TIA) and stroke during one year post discharge in comparison to age- and sex-matched population norms; and to analyse the association of initial stroke severity, measured by a routinely used stroke-... |
00gjgwta | Introduction to the Guidelines | |
00gotrnv | Glycyrrhizin inhibits the manifestations of anti-inflammatory responses that appear in association with systemic inflammatory response syndrome (SIRS)-like reactions | Abstract In association with the systemic inflammatory response syndrome (SIRS), anti-inflammatory response syndrome is commonly manifested in patients with trauma, burn injury, and after major surgery. These patients are increasingly susceptible to infection with various pathogens due to the excessive release of anti-... |
00gzpug4 | Instructive messages from Chinese nurses' stories of caring for SARS patients. | AIM To identify instructive messages to guide nursing practice in future epidemics by examining the stories of Chinese nurses who cared for severe acute respiratory syndrome (SARS) patients. BACKGROUND Mainland China had three outbreaks of SARS between November 2002-May 2004 and suffered the greatest impact on morbidit... |
00h3g1v9 | Five Questions Critical Care Educators Should Ask About Simulation-Based Medical Education | Simulation is now commonly used in health care education, and a growing body of evidence supports its positive impact on learning. However, simulation-based medical education (SBME) involves a range of modalities, instructional methods, and presentations associated with different advantages and limitations. This review... |
00hal07c | The acute phase response of haptoglobin and serum amyloid A (SAA) in cattle undergoing experimental infection with bovine respiratory syncytial virus | Abstract The ability of a pure virus infection to induce an acute phase protein response is of interest as viral infections are normally considered to be less efficient in inducing an acute phase protein response than bacterial infections. This was studied in a bovine model for infection with bovine respiratory syncyti... |
00hmm65p | Psychiatry's Niche Role in the COVID-19 Pandemic. | |
00hp8eub | COVID 2019 pandemic: a true digital revolution and birth of a new educational era, or an ephemeral phenomenon? | |
00ijeoy9 | Corona-Krise: Was zeigt sich in der Herstellung und Bewältigung eines Ausnahmezustandes über die Möglichkeiten und Formen gesellschaftlicher Problembearbeitung? | Der Beitrag setzt sich mit der Frage auseinander, was den gesellschaftlichen Reaktionen auf die Ausbreitung des Coronavirus zu Grunde liegt. In einer sozialwissenschaftlichen Perspektive wird argumentiert, dass diese nicht zureichend als zwangsläufige politische Konsequenz aus Einsichten der medizinischen Virenforschun... |
00iuf67n | What can European radiologists learn from the outbreak of COVID-19 in China? A discussion with a radiologist from Wuhan | |
00j8iq73 | Activity of and effect of subcutaneous treatment with the broad-spectrum antiviral lectin griffithsin in two laboratory rodent models. | Griffithsin (GRFT) is a red-alga-derived lectin that binds the terminal mannose residues of N-linked glycans found on the surface of human immunodeficiency virus type 1 (HIV-1), HIV-2, and other enveloped viruses, including hepatitis C virus (HCV), severe acute respiratory syndrome coronavirus (SARS-CoV), and Ebola vir... |
00jjw3be | WU polyomavirus detected in respiratory tract specimens from young children in Japan | Polyomaviruses (PyV) WU and KI are reportedly associated with respiratory tract disease (RTD) worldwide but their incidence is unclear in Japan. In a 2 year prospective study, WU/KIPyV were detected in 48 (13.9%) and in five (1.4%) of 345 children hospitalized with lower RTD, respectively. The seasonal distribution was... |
00k1dzg0 | Cardiovascular Consequences and Considerations of Coronavirus Infection - Perspectives for the Cardiothoracic Anesthesiologist and Intensivist During the Coronavirus Crisis | |
00ksesmh | Potentiation of macrophage activity by thymol through augmenting phagocytosis | Abstract The potent role of thymol, a natural compound, in modulation of macrophage activity was evaluated by determining all the sequential steps involved during phagocytosis. We found a significant increase in the proliferation of splenocytes in the presence of thymol and it proved to be a good mitogen. Uptake capaci... |
00l2apsc | Knee effusion affects knee mechanics and muscle activity during gait in individuals with knee osteoarthritis. | OBJECTIVE To test the hypothesis that knee effusion presence in those with knee osteoarthritis (OA) alters knee joint muscle activation patterns and sagittal plane mechanics during gait. METHODS Thirty-five patients with medial compartment knee OA were assessed for the presence of effusion using a brush test. Based on ... |
00l9fay7 | Anti-Asian sentiment in the United States - COVID-19 and history | |
00m2g55u | Reaching collective immunity for COVID-19: an estimate with a heterogeneous model based on the data for Italy | Background. At the current stage of COVID-19 pandemic, forecasts become particularly important regarding the possibility that the total incidence could reach the level where the disease stops spreading because a considerable portion of the population has become immune and collective immunity could be reached. Such fore... |
00mbjw1m | Gall bladder rupture associated with cholecystitis in a domestic ferret (Mustela putorius) | A six‐year‐old neutered female albino ferret was presented with an acute episode of lethargy and anorexia. Clinical examination revealed marked cranial abdominal pain. A severe neutrophilic leukocytosis was present. Abdominal ultrasound was consistent with a diffuse peritonitis and severe bile duct inflammation. Cytolo... |
00mqmpzw | The C-Terminal Effector Domain of Non-Structural Protein 1 of Influenza A Virus Blocks IFN-β Production by Targeting TNF Receptor-Associated Factor 3 | Influenza A virus non-structural protein 1 (NS1) antagonizes interferon response through diverse strategies, particularly by inhibiting the activation of interferon regulatory factor 3 (IRF3) and IFN-β transcription. However, the underlying mechanisms used by the NS1 C-terminal effector domain (ED) to inhibit the activ... |
00n9xho8 | Highly sensitive simultaneous electrochemical determination of myricetin and rutin via solid phase extraction on a ternary Pt@r-GO@MWCNTs nanocomposite | The simultaneous electrochemical determination of myricetin and rutin remains a challenge due to their indistinguishable potentials. To solve this problem, we constructed a ternary platinum nanoparticle, reduced graphene oxide, multi-walled carbon nanotubes (Pt@r-GO@MWCNTs) nanocomposite via a facile one-pot synthetic ... |
00nkby8f | Triage tool for the rationing of blood for massively bleeding patients during a severe national blood shortage: guidance from the National Blood Transfusion Committee | The emerging COVID‐19 pandemic has overwhelmed healthcare resources worldwide, and for transfusion services this could potentially result in rapid imbalance between supply and demand due to a severe shortage of blood donors. This may result in insufficient blood components to meet every patient's needs resulting in dif... |
00nzo5ml | Functional nanofibers in sensor applications | Over the last decade, the interest in electrospun nanomaterials and their applications has increased. The fascinating and unparalleled properties of electrospun nanomaterials, such as large surface-to-volume ratios and high open porosity, have opened new and unexpected fields of application, especially in ultrasensitiv... |
00nzuutv | Gastroenteritis aguda | |
00objxul | Exploring Urological Experience in the COVID-19 Outbreak: American Confederation of Urology (CAU) Survey. | PURPOSE To explore the current situation faced by Latin American urology departments during the COVID-19 Outbreak in terms of knowledge, actions, prioritization of urology practices, and implementation of internal clinical management protocols for inpatients and outpatients. MATERIAL AND METHODS A non-validated, struct... |
00od3ff9 | Analysis of Repair Costs of Scholar Buildings Affected by Earthquakes Using Data Mining. Case Study: Earthquakes of 2017 in Mexico | Earthquakes are events that cannot be predicted. However, when they occur, devastating consequences are shown in economic, social and structural areas, among others. In this paper, the mining of association rules is carried out in order to estimate the repair cost required by schools affected during the earthquakes of ... |
00otq8c2 | Apartment complex holds clues to pandemic potential of SARS | |
00pcdxlx | COVID-19: Is a paradigm change to be expected in health care and transfusion medicine? | |
00pi2t96 | Children hospitalized for coronavirus disease 2019 (COVID-19): a multicenter retrospective descriptive study | |
00qgfdyz | Primary B Cell Lymphoma of the Pancreas. | |
00qk10im | Prevention and treatment of COVID-19 disease by controlled modulation of innate immunity | The recent outbreak of coronavirus disease 2019 (COVID-19), triggered by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) poses an enormous threat to global public health and economies. Human coronaviruses normally cause no or mild respiratory disease but in the past two decades, potentially fatal coron... |
00qoe8ir | COVID-19 effects on national health system response to a local epidemic: the case of cerebrospinal meningitis outbreak in Ghana | |
00rezmqj | Intra-arterial administration of a replication-selective adenovirus (dl1520) in patients with colorectal carcinoma metastatic to the liver: a phase I trial | Both replication-incompetent and replication-selective adenoviruses are being developed for the treatment of cancer and other diseases. Concerns have been raised about the safety of intra-vascular adenovirus administration following a patient death on a clinical trial with a replication-defective adenovirus. In additio... |
00rgsut9 | Part 7: CPR techniques and devices: 2010 International Consensus on Cardiopulmonary Resuscitation and Emergency Cardiovascular Care Science With Treatment Recommendations. | |
00rk8fb5 | Severe novel influenza A (H1N1) infection in cancer patients | Background: The natural history and consequences of severe H1N1 influenza infection among cancer patients are not yet fully characterized. We describe eight cases of H1N1 infection in cancer patients admitted to the intensive care unit of a referral cancer center. Patients and methods: Clinical data from all patients a... |
00rq0ggi | Transmission routes of Covid-19 virus in the Diamond Princess Cruise ship | Background: An outbreak of COVID-19 occurred on the Diamond Princess cruise ship in January and February 2020. We analysed information about cases to infer transmission dynamics and potential modes of transmission. Methods: We collected the daily number of 197 symptomatic cases, and that of the 146 passenger cases in t... |
00rsnjsh | Resection of rectal GIST using a novel technique: a report of two cases. | Rectal gastrointestinal stromal tumours (GISTs) are uncommon tumours and usually present with large sizes. We present two cases of rectal GIST. Imatinib was used in the setting of neoadjuvant and adjuvant therapy. Both tumours were resected transanally by the transanal endoscopic operation (TEO) platform. Oncosurgeons ... |
00rugcs8 | Características epidemiológicas, clínicas y terapéuticas de lactantes hospitalizados por bronquiolitis | Resumen Objetivos Describir los datos epidemiológicos, clínicos y actitud terapéutica empleada en los lactantes hospitalizados por bronquiolitis en nuestro medio. Material y métodos Estudio observacional, descriptivo y prospectivo de lactantes menores de 18 meses ingresados en Hospital Virgen de la Arrixaca (Murcia) co... |
00s2pabm | Optimal blood pressure after reperfusion therapy in patients with acute ischemic stroke. | We investigated the relationship between the mean blood pressure (BP) at 24-72 h and the clinical outcomes after acute ischemic stroke (AIS) in patients treated with reperfusion therapy. The primary outcome was measured using the modified Rankin Scale (mRS) at 3 months after AIS, and was based on the mean systolic BP a... |
00s4fz9j | Biomedical Research Goes Viral: Dangers and Opportunities | Researchers around the globe have been mounting, accelerating and redeploying efforts across disciplines and organizations to tackle the SARS CoV-2 outbreak. However, humankind continues to be afflicted by numerous other devastating diseases in increasing numbers. Here, we outline considerations and opportunities towar... |
00sospz3 | Hybrid Single-Port Cholecystectomy Vs Four-Port Cholecystectomy in Children. | BACKGROUND AND OBJECTIVES Evidence is increasing that single-port or single-incision laparoscopic cholecystectomy is a safe and feasible alternative for cholecystectomy in children. In this study, we sought to compare the single-port hybrid technique, which we originally reported in 2012, with the conventional 4-port a... |
00ssu6r8 | Introduction: What Is This Volume About? | In these early years of the twenty-first century, it can often seem that across the globe we are living in a world of crisis. When we began this book, there were bombings at the end of the Boston Marathon of 2013, an army coup in Egypt that overthrew the first democratically elected government, an armed conflict in Syr... |
00t28df6 | Bovine Neonatal Pancytopenia: Is this alloimmune syndrome caused by vaccine-induced alloreactive antibodies? | Bovine Neonatal Pancytopenia (BNP) is a new emerging disease observed since 2007 in Germany and neighbouring countries. The syndrome affects newborn calves and is characterized by pancytopenia, severe bleeding and high lethality. So far, a causative role of infectious or toxic agents has been ruled out. Instead, the sy... |
00tal94i | Grammatical Inference by Answer Set Programming | In this paper, the identification of context-free grammars based on the presentation of samples is investigated. The main idea of solving this problem proposed in the literature is reformulated in two different ways: in terms of general constrains and as an answer set program. In a series of experiments, we showed that... |
00te6lvd | The World Glaucoma Association during the COVID-19 Pandemic. | |
00tgpr65 | The challenge of intracellular antibiotic accumulation, a function of fluoroquinolone influx versus bacterial efflux. | With the spreading of antibiotic resistance, the translocation of antibiotics through bacterial envelopes is crucial for their antibacterial activity. In Gram-negative bacteria, the interplay between membrane permeability and drug efflux pumps must be investigated as a whole. Here, we quantified the intracellular accum... |
00tprg6w | North East London coronavirus disease 2019 protocol for diagnostics in two-week wait head and neck cancer patients. | |
00tug46j | Self Assessment |
End of preview. Expand in Data Studio
TRECCOVID — BEIR, unified schema
A normalised copy of the dataset behind the mteb task TRECCOVID, one of the tasks of the BEIR benchmark as mteb defines it. Same queries, documents
and relevance judgements as the benchmark evaluates — reshaped into one strict schema shared by every dataset
in this collection.
| Source | mteb/trec-covid @ bb9466bac815 (the revision pinned in mteb) |
| Domain · languages | biomedical · eng |
| Queries / documents / qrels | 50 / 171,332 / 66,336 |
| Qrels per query | min 631 · mean 1326.72 · max 1941 |
| Score values | -1 ×2, 0 ×41,661, 1 ×10,456, 2 ×14,217 |
| Layout | queries · corpus · qrels, split test |
| License | cord-19 |
Schema
| config | columns | rules |
|---|---|---|
queries |
id: string, text: string |
ids unique and non-empty; every query has ≥ 1 qrel |
corpus |
id: string, title: string, text: string |
title is always present ("" when the source has none) |
qrels |
query-id: string, corpus-id: string, score: int32 |
referential integrity to both tables; no duplicate pairs; no floats |
Files are Parquet, sorted by id, zstd-compressed, sharded at 500 MB. Every rule above is enforced by a validator
before publishing; provenance.json records the source file hashes, what changed, and the output file hashes.
What changed from the source
- byte-preserved all text — no whitespace, newline, or control-character normalisation
- cast
qrels.scoredouble -> int32 - kept 1 documents whose title and text are both empty — they are in the source and the benchmark's corpus
- kept 46,180 documents whose text is identical to another document's — a property of the source; note that models embed such documents identically and retrieval ties among them are broken by corpus order
- renamed
_id→id - renamed source splits (
queries←queries/queries,corpus←corpus/corpus) totest
Load it
from datasets import load_dataset
queries = load_dataset("Hyukkyu/beir-trec-covid", "queries", split="test")
corpus = load_dataset("Hyukkyu/beir-trec-covid", "corpus", split="test")
qrels = load_dataset("Hyukkyu/beir-trec-covid", "qrels", split="test")
Cross-check against the previous layout
This repo previously held the same dataset in BEIR's raw two-repo form (Hyukkyu/beir-trec-covid + Hyukkyu/beir-trec-covid-qrels; that layout is kept under the git tag legacy-layout). Before replacing it, the build was compared against it: corpus id set identical (171,332 documents); qrels rows per split test 66,336 = 66,336.
License and attribution
The data is redistributed under the source's terms — cord-19. All credit belongs to the
original authors; see the source repository and the references in mteb's task metadata (https://ir.nist.gov/covidSubmit/index.html).
This repository is an independent repackaging and is not affiliated with the RTEB or MTEB maintainers.
License discrepancy. The upstream dataset card declares
cord-19whilemteb'sTaskMetadatadeclaresnot specified. This card carries the upstream value as the more conservative choice.
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